Information for 4-TCARKTRGATGY (Motif 4)

A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C G T A G T C A G T C C G T A G T A C A G C T A C G T A C T G C G T A
p-value:1e-15
log p-value:-3.654e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif5.36%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets83.8 +/- 69.7bp
Average Position of motif in Background123.0 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCARKTRGATGY
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TCARKTRGATGY
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCARKTRGATGY
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCARKTRGATGY
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCARKTRGATGY
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCARKTRGATGY
NTCAAGTGG----
 A C G T A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCARKTRGATGY
NTCAAGTGGN---
 A C G T A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCARKTRGATGY
GTCACGTGGM---
 A C G T A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCARKTRGATGY
----GTGGAT--
 A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCARKTRGATGY
VCAGGTRDRY--
 A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T