Information for 5-YATAGMAMTCTC (Motif 5)

A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C
Reverse Opposite:
A C T G C G T A A T C G C G T A A C G T A C G T A C G T A G T C A C G T C G T A C G A T C T A G
p-value:1e-15
log p-value:-3.520e+01
Information Content per bp:1.875
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif9.82%
Number of Background Sequences with motif92.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets99.5 +/- 47.7bp
Average Position of motif in Background107.6 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YATAGMAMTCTC------
---NNAATTCTCGNTNAN
 A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YATAGMAMTCTC------
---ACCACTCTCGGTCAC
 A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YATAGMAMTCTC------
---AGTATTCTCGGTTGC
 A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-YATAGMAMTCTC----
NNNCTGATATCTCNNNN
 A C G T A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----YATAGMAMTCTC
TATCATTAGAACGCT-
 A C G T A C G T A C G T A C G T A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--YATAGMAMTCTC-
NAGATWNBNATCTNN
 A C G T A C G T A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-YATAGMAMTCTC--
TTCTAGAABNTTCTA
 A C G T A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YATAGMAMTCTC--
----CAAATCACTG
 A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:YATAGMAMTCTC---
-----AAATCACTGC
 A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-YATAGMAMTCTC
TTCTAGAACGTTC
 A C G T A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C