Information for 6-AGTGTGTTTTTC (Motif 6)

C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A G T C A C G T A C G T A C T G A A G T C C G T A A G T C G T C A A G T C A C G T
p-value:1e-15
log p-value:-3.508e+01
Information Content per bp:1.850
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif9.82%
Number of Background Sequences with motif93.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets100.1 +/- 52.9bp
Average Position of motif in Background97.2 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF4/MA0039.3/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGTGTGTTTTTC
NNAGGGTGTGG---
 A C G T A C G T C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C
C T A G T A G C C G T A C T A G A C T G T C A G G A C T C A T G A G C T A C T G A C T G A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTGTGTTTTTC-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGTTTTTC
GAATGTTTGTTT-
 A C G T C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGTGTGTTTTTC-
--TGTGGATTNNN
 C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGTGTGTTTTTC
NNTGTGGATTSS
 C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGTGTGTTTTTC
-AGGTGTGA---
 C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGTGTGTTTTTC--
NCNTTTGTTATTTNN
 A C G T C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTGTGTTTTTC
-AGGTGTGA---
 C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTGTGTTTTTC
AAGGTGTKAA--
 C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGTGTGTTTTTC----
-NNNTGTTGTTGTTNG
 C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G