Information for 11-ATCATCGTTA (Motif 17)

G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A
Reverse Opposite:
G C A T C T G A G C T A A G T C T A C G C T G A A C G T C T A G C G T A C A G T
p-value:1e-6
log p-value:-1.546e+01
Information Content per bp:1.769
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif192.3
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets85.2 +/- 60.7bp
Average Position of motif in Background106.1 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATCATCGTTA-----
AAAACATCGTTTTTAAG
 A C G T A C G T G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ATCATCGTTA
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCGTTA---
NTTATTCGTCATNC
 A C G T G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T A C G T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCATCGTTA---
CTATAATTGTTAGCG
 A C G T A C G T G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

CUX2/MA0755.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATCATCGTTA-
-TAATCGATAA
 G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATCATCGTTA----
TACCCTAGTTACCGA
 A C G T G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATCATCGTTA----
TATCATAATTAAGGA
 A C G T G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCATCGTTA-
-TAATCGATAA
 G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

HOXC10/MA0905.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATCATCGTTA---
---GTCGTAAAAT
 G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATCATCGTTA---
---GTCGTAAAAA
 G T C A C G A T A G T C G T C A G A C T A T G C C T A G C G A T G A C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A