Information for 8-GVARGGAAAGGA (Motif 19)

T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A
Reverse Opposite:
A C G T A T G C G T A C G A C T G A C T A C G T G T A C T A G C A G T C C G A T A C T G A G T C
p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.560
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif72.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets116.0 +/- 45.2bp
Average Position of motif in Background109.1 +/- 47.5bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GVARGGAAAGGA
GAAAGTGAAAGT-
 A C G T T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GVARGGAAAGGA---
---CGGAAGTGAAAC
 T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GVARGGAAAGGA--
--ANGNAAAGGTCA
 T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A A C G T A C G T
A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GVARGGAAAGGA--
--AGGTCAAGGTCA
 T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GVARGGAAAGGA--
--TGGGGAAGGGCM
 T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A A C G T A C G T
A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GVARGGAAAGGA-
---TGGAACAGMA
 T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A A C G T
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GVARGGAAAGGA----
--GGAGAAAGGTGCGA
 T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GVARGGAAAGGA----
----GGAAGTGAAAST
 T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GVARGGAAAGGA--
--AGGTCAAGGTCA
 T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A A C G T A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GVARGGAAAGGA
AGAAACGAAAGT-
 A C G T T C A G T G A C G C T A T C A G A T C G C A T G T G C A C T G A C T G A C A T G T A C G T G C A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T