Information for 12-CCCATGTCACTG (Motif 25)

A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G A C G T A C T G C G T A A G T C C T G A A C G T A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.146e+01
Information Content per bp:1.947
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.2 +/- 47.5bp
Average Position of motif in Background91.3 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCATGTCACTG
--CCTGTCAA--
 A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCATGTCACTG----
NNNCCTGTCACTCANNN
 A C G T A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCCATGTCACTG
----AGTCACGC
 A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCATGTCACTG
---NTGTCAN--
 A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCATGTCACTG
GTGCCACGTCATCA
 A C G T A C G T A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCATGTCACTG
GCCACGTGACC-
 A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

PBX2/MA1113.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCCATGTCACTG--
--NCTGTCAATCAN
 A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T A C G T
A C G T A C G T A T G C T A G C G A C T T C A G G A C T T G A C G T C A T G C A G A C T G T A C G C T A A G T C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCCATGTCACTG
---ACGTCA---
 A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCATGTCACTG
-VGCTGWCAVB-
 A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCATGTCACTG-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A G T C G T A C A G T C C G T A A G C T A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T