Information for 23-TCTGCAGGCACG (Motif 32)

A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A G T C A G T C C G A T A C T G A G T C C T G A A C T G C G T A
p-value:1e-2
log p-value:-5.648e+00
Information Content per bp:1.939
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets77.7 +/- 61.4bp
Average Position of motif in Background142.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCTGCAGGCACG---
----AAGGCAAGTGT
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

HIF1A/MA1106.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCTGCAGGCACG---
-----NNGCACGTNC
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TCTGCAGGCACG--
------BGCACGTA
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TCTGCAGGCACG---
-------GCACGTAY
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TCTGCAGGCACG---
-------GCACGTNC
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TCTGCAGGCACG----
------GGCACGCGTC
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCAGGCACG
DCTCAGCAGG----
 A C G T A C G T A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCTGCAGGCACG---
-----TBGCACGCAA
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TCTGCAGGCACG----
------GGCACGTGTC
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCTGCAGGCACG-----
-----TGGCACGTGCCG
 A C G T A G T C A G C T T C A G A G T C C G T A A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G