Information for 20-CACGCCGGGG (Motif 33)

A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C G T A C A G T C A C T G A C T G A G T C A C T G A C G T A C T G
p-value:1e-2
log p-value:-5.434e+00
Information Content per bp:1.927
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif46.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets93.3 +/- 56.9bp
Average Position of motif in Background92.8 +/- 52.4bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)2.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CACGCCGGGG
CACGCA----
 A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CACGCCGGGG
TBGCACGCAA---
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACGCCGGGG---
NCCCCCCCGGGGGGN
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CACGCCGGGG---
ACCCCCCCGGGGGGN
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACGCCGGGG---
ACATGCCCGGGCAT
 A C G T A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACGCCGGGG
GCACGTNC---
 A C G T A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACGCCGGGG----
CAGGCCNNGGCCNN
 A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACGCCGGGG---
CCCCCCCGGGGGNN
 A C G T A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACGCCGGGG
AGCGCGCC----
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACGCCGGGG----
NCNCAGCGGGGGGTC
 A C G T A G T C C G T A A G T C A C T G A G T C G T A C A C T G A C T G A T C G A C T G A C G T A C G T A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C