Information for 5-CGCGTCGA (Motif 34)

A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A
Reverse Opposite:
A G C T T A G C A T C G T C G A A G T C C A T G A T G C T A C G
p-value:1e-2
log p-value:-4.644e+00
Information Content per bp:1.466
Number of Target Sequences with motif605.0
Percentage of Target Sequences with motif29.21%
Number of Background Sequences with motif12889.8
Percentage of Background Sequences with motif26.89%
Average Position of motif in Targets99.6 +/- 57.9bp
Average Position of motif in Background99.9 +/- 54.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGCGTCGA-------
TCCGTCGCTTAAAAG
 A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCGTCGA
AGCGCGCC--
 A C G T A C G T A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTCGA
GCACGTNC-
 A C G T A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:4
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------CGCGTCGA-------
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCGTCGA
TGCGTG--
 A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGCGTCGA-
---GTGGAT
 A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A A C G T
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTCGA
ACACGTGGC
 A C G T A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------CGCGTCGA
NNGCNCTGCGCGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGCGTCGA
NNGCACGTNC-
 A C G T A C G T A C G T A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CGCGTCGA---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A C G G T A C T C A G A G C T T A G C A T C G T C G A A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G