Information for 4-CCATCTGAGA (Motif 5)

A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
Reverse Opposite:
A G C T G A T C G C A T A G T C C G T A A C T G C G T A A G C T C T A G A C T G
p-value:1e-9
log p-value:-2.136e+01
Information Content per bp:1.739
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1332.5
Percentage of Background Sequences with motif2.78%
Average Position of motif in Targets96.5 +/- 57.3bp
Average Position of motif in Background101.2 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCATCTGAGA
NNNCCATCTGTNN
 A C G T A C G T A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCATCTGAGA
GCCATCTGTT-
 A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCATCTGAGA
ACCATCTGTT-
 A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCATCTGAGA
CCATATGT--
 A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCATCTGAGA
RCCATMTGTT-
 A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCATCTGAGA--
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCATCTGAGA
ACCATATGTT-
 A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCATCTGAGA
NAMCAGCTGK--
 A C G T A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
C T A G T C G A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T A C G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCATCTGAGA
SMCATCTGKH-
 A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCATCTGAGA
ACCATATGGT-
 A C G T A G T C A G T C C T G A C G A T T G A C C G A T T C A G C G T A C T A G C T G A
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T