Information for 4-AACTTATTTAGT (Motif 8)

C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C C G A T C G T A C G T A C T G A A C G T C G T A G T C A A C T G A C G T A G C T
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.876
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets85.8 +/- 55.3bp
Average Position of motif in Background101.2 +/- 74.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0147.1_Pou3f2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AACTTATTTAGT---
GATAATTAATTAGTTTG
 A C G T A C G T C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

PH0154.1_Prrx1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AACTTATTTAGT---
ANNAGTTAATTAGTTAN
 A C G T A C G T C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

mix-a/MA0621.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AACTTATTTAGT
-AATTAATTAGT
 C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T
A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACTTATTTAGT----
NNNTTAATTGGTTTTN
 C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

PH0175.1_Vax2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AACTTATTTAGT----
GNCTTAATTAGTGNNN
 C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C

PH0143.1_Pou2f1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AACTTATTTAGT----
TACTTAATTAATNNAN
 C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AACTTATTTAGT----
GNATTAATTAGTTNNC
 C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0135.1_Phox2a/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AACTTATTTAGT--
CAGCATTAATTAGTAG
 A C G T A C G T C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T A C G T A C G T
A G T C T C G A A C T G G T A C T C G A G A C T A G C T C G T A C T G A C G A T A C G T C T G A C T A G A G C T T C A G T A C G

LHX2/MA0700.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AACTTATTTAGT
--NNTAATTAGN
 C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T
A C G T A C G T T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T

PH0159.1_Rhox6/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AACTTATTTAGT----
TGCCTTAATTAATGCTC
 A C G T C T G A C G T A G T A C A C G T A C G T C G T A A G C T A C G T C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C