Information for 12-GTGAGAGGTGCA (Motif 10)

A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A
Reverse Opposite:
A C G T A C T G A G T C C G T A A G T C A G T C A G C T T G A C A C G T A G T C C G T A A G T C
p-value:1e-5
log p-value:-1.220e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif30.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets89.0 +/- 66.6bp
Average Position of motif in Background114.8 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ID4/MA0824.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTGAGAGGTGCA
--GACAGGTGTN
 A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A
A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGAGAGGTGCA-
GGAGAAAGGTGCGA
 A C G T A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGAGGTGCA-
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGAGGTGCA-
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTGAGAGGTGCA
--AACAGGTGT-
 A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGAGAGGTGCA-
-TGACAGGTGTCA
 A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A A C G T
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGAGGTGCA
NGNGACAGCTGCN
 A C G T A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGAGGTGCA-
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGAGAGGTGCA----
ATCCACAGGTGCGAAAA
 A C G T A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTGAGAGGTGCA
--NNCAGGTGCG
 A C T G A C G T A C T G C G T A A C T G C T G A A C T G A C T G A C G T A C T G A G T C G T C A
A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G