Information for 1-TCCGTTAG (Motif 9)

A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G
Reverse Opposite:
A G T C A G C T C G T A C G T A A G T C A C T G C A T G C G T A
p-value:1e-6
log p-value:-1.493e+01
Information Content per bp:1.849
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif7.39%
Number of Background Sequences with motif596.7
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets131.0 +/- 33.2bp
Average Position of motif in Background99.4 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCCGTTAG
BRRCVGTTDN
 A C G T A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCCGTTAG
TGTCGGTT--
 A C G T A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCGTTAG
BCMATTAG
 A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

GMEB2/MA0862.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCGTTAG
TTACGTAA-
 A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G
A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCGTTAG
GGCVGTTR-
 A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCGTTAG
TGGCAGTTGG
 A C G T A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCCGTTAG------
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TCCGTTAG---
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCCGTTAG------
TATCATTAGAACGCT
 A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0081.1_Tcf1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCGTTAG------
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T G T A C G T A C C T A G A C G T A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T