Information for 1-AGTCAGTCTGCC (Motif 1)

C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C
Reverse Opposite:
C T A G A C T G G T A C C G T A C T A G G T C A G T A C A C G T A C T G C G T A G T A C A C G T
p-value:1e-11
log p-value:-2.750e+01
Information Content per bp:1.880
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets75.9 +/- 51.8bp
Average Position of motif in Background90.1 +/- 55.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGTCAGTCTGCC-
NAGGTCACNNTGACC
 A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGTCTGCC--
AGGTCACCCTGACCT
 A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTCAGTCTGCC
---CTGTCTGG-
 C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTCAGTCTGCC
---TWGTCTGV-
 C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTCAGTCTGCC
-VBSYGTCTGG-
 C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGTCAGTCTGCC
--TCAGTCTT--
 C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTCAGTCTGCC--
TGGCAGNCTGCCAG
 C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C A C G T A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGTCAGTCTGCC
AAAAGTCAA------
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGTCAGTCTGCC
AGTCACGC----
 C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGTCAGTCTGCC----
---CTGTCTGTCACCT
 C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T