Information for 5-TCTGGCGWAT (Motif 11)

A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
Reverse Opposite:
C G T A G A C T C G T A A G T C A C T G G T A C A G T C C G T A A C T G C G T A
p-value:1e-7
log p-value:-1.826e+01
Information Content per bp:1.886
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.8 +/- 50.3bp
Average Position of motif in Background120.5 +/- 53.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCGWAT
GGTCTGGCAT--
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGCGWAT
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGCGWAT
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCTGGCGWAT----
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCTGGCGWAT
CTGTCTGG-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTGGCGWAT----
CTCTCGCGAGATCTG
 A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCGWAT
TGTCTAGA----
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTGGCGWAT
NTTGGCANN-
 A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCTGGCGWAT
--TGACGT--
 A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T

TWIST1/MA1123.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGGCGWAT
NNACATCTGGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C T G C G A T C T G A A C G T
C T G A T G C A T G C A T G A C C T G A A C G T T A G C G C A T C A T G A C T G G C T A C G T A G A C T A C G T A C G T