Information for 11-GATTTCAAATCA (Motif 19)

A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A
Reverse Opposite:
C A G T C T A G C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A G T C
p-value:1e-6
log p-value:-1.554e+01
Information Content per bp:1.885
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets125.8 +/- 55.6bp
Average Position of motif in Background114.1 +/- 45.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GATTTCAAATCA
CGGTTTCAAA---
 A C G T A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GATTTCAAATCA
-NATTCAAAT--
 A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GATTTCAAATCA---
-----CAAATCACTG
 A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GATTTCAAATCA-----
AAGGCGAAATCATCGCA
 A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATTTCAAATCA
-ACATCAAAGG-
 A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GATTTCAAATCA
CCGTATTATAAACAA
 A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GATTTCAAATCA
-ASATCAAAGG-
 A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A
A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GATTTCAAATCA-
-----CCAATCAA
 A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GATTTCAAATCA-----
------AAATCACAGCA
 A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GATTTCAAATCA
-ACWTCAAAGG-
 A C T G C G T A A C G T A C G T C G A T A G T C C G T A C G T A C G T A A C G T A G T C G C T A
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T