Information for 1-ACTACTGTGC (Motif 2)

C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C
Reverse Opposite:
C T A G A T G C C G T A A T G C C G T A T A C G C G A T C G T A A T C G C G A T
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.768
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.44%
Number of Background Sequences with motif489.9
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets97.3 +/- 63.0bp
Average Position of motif in Background99.8 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACTACTGTGC--
RGMCCTACTRTGTGC
 A C G T A C G T A C G T C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACTACTGTGC--
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTACTGTGC----
NNNNTTGTGTGCTTNN
 A C G T A C G T C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ACTACTGTGC--
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ACTACTGTGC----
----CTGTTCCTGG
 C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACTACTGTGC
---GCTGTG-
 C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACTACTGTGC
ACCAACTGTC-
 A C G T C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTACTGTGC---
NNNCCATTGTGTNAN
 A C G T A C G T C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACTACTGTGC--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACTACTGTGC-----
AATCAATTGTTCCGCTA
 A C G T A C G T C G T A T A G C G C A T C G T A A T G C A C G T T A C G A C G T A T C G G A T C A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A