Information for 16-TTGCATTTAGAT (Motif 24)

A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T
Reverse Opposite:
T G C A G A C T A G T C G C A T C T G A C G T A C G T A C G A T C T A G A T G C C G T A T C G A
p-value:1e-5
log p-value:-1.329e+01
Information Content per bp:1.665
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.44%
Number of Background Sequences with motif814.2
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets85.6 +/- 56.5bp
Average Position of motif in Background99.7 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTGCATTTAGAT
--BCMATTAG--
 A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T
A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGCATTTAGAT
-NNCAATTANN-
 A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T
A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGCATTTAGAT
--GCACTTAA--
 A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGCATTTAGAT-----
ATTTCCTTTGATCTATA
 A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTGCATTTAGAT
NATTTGCATNN----
 A C G T A C G T A C G T A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGCATTTAGAT-----
NNTTCCTTTGATCTANA
 A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATTTAGAT
ATTTGCATAT----
 A C G T A C G T A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TTGCATTTAGAT
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTGCATTTAGAT
GGGATTGCATNN----
 A C G T A C G T A C G T A C G T A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTGCATTTAGAT-----
AATCCCTTTGATCTATC
 A G C T C G A T T A C G G A T C G C T A G C A T C G A T A G C T C G T A C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C