Information for 12-GAGAGATGGT (Motif 26)

A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A C G A T A T G C A C G T A G T C A G C T A G T C
p-value:1e-4
log p-value:-9.348e+00
Information Content per bp:1.924
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif128.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets104.2 +/- 45.9bp
Average Position of motif in Background95.6 +/- 63.4bp
Strand Bias (log2 ratio + to - strand density)3.6
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAGAGATGGT--
GGACAGATGGCAG
 A C G T A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAGAGATGGT
AACAGATGGT
 A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAGAGATGGT
AACAGATGGC
 A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGAGATGGT----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGAGATGGT--
AACAGATGGTCN
 A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T A C G T A C G T
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGAGATGGT
AACAKATGGY
 A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGAGATGGT
VNAVCAGCTGGC
 A C G T A C G T A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGATGGT--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAGAGATGGT--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGAGATGGT-
-MCAGCTGKTN
 A C T G C T G A A C T G C G T A A T C G G C T A A C G T A C T G A C T G A C G T A C G T
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A G C T G A T C