Information for 13-GSCAGCGAAG (Motif 27)

A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T A T G C A C T G A G T C A C G T A C T G A T C G A G T C
p-value:1e-3
log p-value:-8.937e+00
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif55.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets93.9 +/- 52.3bp
Average Position of motif in Background115.9 +/- 67.2bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)2.83
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GSCAGCGAAG
TGCCAGCB---
 A C G T A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GSCAGCGAAG
--CAGCC---
 A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GSCAGCGAAG------
-SCAGYCADGCATGAC
 A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GSCAGCGAAG-
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GSCAGCGAAG-
RHHCAGAGAGGB
 A C G T A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GSCAGCGAAG-------
-GCAGCCAAGCGTGACN
 A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GSCAGCGAAG
CACAGN----
 A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GSCAGCGAAG-
GTCAGCANNTN
 A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GSCAGCGAAG
TGAGTCAGCA---
 A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GSCAGCGAAG
CGTGCCAAG----
 A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G A G T C A T C G C G T A C G T A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T