Information for 20-TATTTTATGTAC (Motif 28)

A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C G T C G T A
p-value:1e-3
log p-value:-7.908e+00
Information Content per bp:1.975
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.4 +/- 46.2bp
Average Position of motif in Background132.0 +/- 49.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0056.1_Hoxa9/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTATGTAC--
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATTTTATGTAC
CTATTTTTGG---
 A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTATGTAC--
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TATTTTATGTAC---
----TTATGTAACAT
 A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TATTTTATGTAC----
NNNNTTGTGTGCTTNN
 A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TATTTTATGTAC
--TTTTATGGCM
 A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C
A C G T A C G T C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TATTTTATGTAC--
NGANTTTTATGGCTCN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TATTTTATGTAC
-NTTTTATGAC-
 A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATTTTATGTAC---
NAATTTTATTACCNNN
 A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTATGTAC
TTCTATTTTTAGNNN
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T C A A G T C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T