Information for 4-TTTATAATAAGC (Motif 5)

A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
Reverse Opposite:
C A T G A G T C A C G T A C G T C G T A C G A T C G A T C G T A A C G T C G T A G T C A C G T A
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.833
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets67.7 +/- 41.8bp
Average Position of motif in Background117.7 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTTATAATAAGC
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TTTATAATAAGC
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTTATAATAAGC
TAAGATTATAATACGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTTATAATAAGC
GCTAATTATAATTATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTTATAATAAGC
TTTAATTATAATTAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TTTATAATAAGC-
---NTAATGAGCT
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C A C G T
A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTATAATAAGC
TTTTATTGC----
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTATAATAAGC
DGWTTTATGRCN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTATAATAAGC
NTTTTATGAC----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTATAATAAGC
GTTAATNATTAAC
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T T C G A C G T A C T A G G T A C
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C