Information for 2-ATTGTTTCAA (Motif 7)

C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A
Reverse Opposite:
A C G T C G A T T C A G T G C A T G C A C G T A A T G C G T C A G T C A A G C T
p-value:1e-9
log p-value:-2.073e+01
Information Content per bp:1.820
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif5.03%
Number of Background Sequences with motif720.9
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets122.8 +/- 52.8bp
Average Position of motif in Background102.0 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:ATTGTTTCAA
ATTGTTA---
 C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----ATTGTTTCAA--
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ATTGTTTCAA
ATTGTTTAN-
 C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTTCAA-
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATTGTTTCAA
ATTGTT----
 C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTTCAA--
TAATTGTTCTAAAC
 A C G T A C G T C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTTCAA--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTTCAA-
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTTCAA
CCATTGTTC---
 A C G T A C G T C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.72
Offset:-9
Orientation:reverse strand
Alignment:---------ATTGTTTCAA---
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T T A C G G C A T A C G T A C G T A G T C G C T A G T C A A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T