Information for 2-TTSAACGC (Motif 13)

A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C
Reverse Opposite:
A C T G G T A C A T C G A C G T A G C T A T C G C G T A G T C A
p-value:1e-16
log p-value:-3.775e+01
Information Content per bp:1.810
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif14.18%
Number of Background Sequences with motif471.5
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets97.1 +/- 52.9bp
Average Position of motif in Background102.6 +/- 70.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTSAACGC-
-TGAACTCA
 A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C A C G T
A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTSAACGC-
TTTGAAACCG
 A C G T A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTSAACGC-
---CACGCA
 A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C A C G T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTSAACGC
ACATCAAAGG
 A C G T A C G T A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTSAACGC--
TTGAMCTTTG
 A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C A C G T A C G T
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTSAACGC----
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C A C G T A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

MYBL2/MA0777.1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTSAACGC--
GACNGTTTAACGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTSAACGC
NATTCAAAT-
 A C G T A C G T A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTSAACGC--------
-TTAACCCTTTVNKKN
 A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTSAACGC--
NTCAAGGTCA
 A C G T A C G T T A G C C T G A C G T A A T G C A C T G A G T C A C G T A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A