Information for 20-AAAAGTACAC (Motif 17)

C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif3.55%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets84.8 +/- 47.5bp
Average Position of motif in Background88.6 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAAAGTACAC---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAAAGTACAC--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAAAGTACAC-
-AAAGTAAACA
 C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAAAGTACAC-
-AAAGTAAACA
 C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGTACAC-----
TTCNAAGTACTTNNNNN
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTACAC------
AAAAAGTAAACAAAGAC
 A C G T C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAAGTACAC---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAAGTACAC-----
CAAAGTAAACANNNN
 C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AAAAGTACAC
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAAGTACAC
--AAGGTCAC
 C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C