Information for 18-ATCACCTAGGTG (Motif 19)

C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.010e+01
Information Content per bp:1.907
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets98.7 +/- 59.6bp
Average Position of motif in Background116.8 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T/MA0009.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATCACCTAGGTG---
TCACACCTAGGTGTGA
 A C G T C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
G A C T T G A C C T G A A G T C C T G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

TBX19/MA0804.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATCACCTAGGTG-----
TTTCACACCTAGGTGTGAAA
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATCACCTAGGTG
-TGACCTARTT-
 C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATCACCTAGGTG
-TGACCTARTT-
 C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

RORB/MA1150.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATCACCTAGGTG
NTGACCTAATT-
 C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T A C G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATCACCTAGGTG
BTGACCTAVTTW
 C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATCACCTAGGTG------
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCACCTAGGTG
-TGACCTTGAT-
 C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATCACCTAGGTG
ACCACCTGTT--
 C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:ATCACCTAGGTG---
-------AGGTGTCA
 C G T A A C G T A G T C C G T A G T A C A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A