Information for 3-TTCACCTCACAG (Motif 2)

A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G
Reverse Opposite:
A G T C A C G T A T C G A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A C G T A
p-value:1e-32
log p-value:-7.479e+01
Information Content per bp:1.940
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif9.93%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets90.6 +/- 48.8bp
Average Position of motif in Background89.5 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTCACCTCACAG
ATCACCCCAC--
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCACCTCACAG
ATCACCCCAT--
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTCACCTCACAG
CNGTCACGCCAC--
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCACCTCACAG
-TGACCTYA---
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTCACCTCACAG
ATCACCCCAT--
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTCACCTCACAG-
---ACWTCAAAGG
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G A C G T
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCACCTCACAG
VSCACATCAAAG
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCACCTCACAG
GTGACGTCACCG
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTCACCTCACAG-
---ACATCAAAGG
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G A C G T
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TTCACCTCACAG-
-------CACAGN
 A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C C G T A A T G C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C