Information for 9-GAAACACTCTKT (Motif 6)

A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T
Reverse Opposite:
G T C A G T C A C T G A A T C G C G T A A C T G C G A T A C T G A C G T A C G T A C G T A G T C
p-value:1e-27
log p-value:-6.420e+01
Information Content per bp:1.906
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif9.22%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets105.6 +/- 53.4bp
Average Position of motif in Background104.5 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAAACACTCTKT
-MRSCACTYAA-
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAACACTCTKT
-NAACAAT----
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAAACACTCTKT-
TWGHWACAWTGTWDC
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAACACTCTKT-
YDGHTACAWTGTADC
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAACACTCTKT
-AAGCACTTAA-
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAACACTCTKT
-AASCACTCAA-
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

KLF4/MA0039.3/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAACACTCTKT
-CCACACCCTGC
 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T
A C G T T G A C T G A C T C G A G T A C C T G A A G T C T G A C G A T C G C A T A T C G G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAACACTCTKT--
AAGAACATWHTGTTC
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAACACTCTKT
GTAAACAG-----
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAAACACTCTKT
ACTGAAACCA-----
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A T G C A G C T C A G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T