Information for 9-TTCGAGTC (Motif 5)

A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C
Reverse Opposite:
A C T G C G T A A T G C A C G T A G T C A C T G C G T A C G T A
p-value:1e-94
log p-value:-2.184e+02
Information Content per bp:1.953
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif31.71%
Number of Background Sequences with motif694.8
Percentage of Background Sequences with motif2.10%
Average Position of motif in Targets96.8 +/- 63.9bp
Average Position of motif in Background108.5 +/- 100.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCGAGTC-
NTCAAGTGG
 A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTCGAGTC-----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTCGAGTC-----
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGAGTC--
TNAGTTTCGATTTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TTCGAGTC-
TNTGGTTTCGATACN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCGAGTC--
CTYRAGTGSY
 A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCGAGTC
ATTTGAATT
 A C G T A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTCGAGTC-----
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTCGAGTC-----
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTCGAGTC--
GGTTAGAGACCT
 A C G T A C G T A C G T A C G T A G T C C T A G C G T A A T C G A C G T A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T