Information for 11-TGTGGATTCC (Motif 16)

A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
Reverse Opposite:
A C T G A C T G C G T A T C G A A C G T A G T C A G T C C G T A G T A C C G T A
p-value:1e-4
log p-value:-1.092e+01
Information Content per bp:1.870
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif178.9
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets85.1 +/- 53.1bp
Average Position of motif in Background104.6 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TGTGGATTCC-
TGTGGATTNNN
 A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--TGTGGATTCC
NNTGTGGATTSS
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TGTGGATTCC
-GTGGAT---
 A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGTGGATTCC
GTCTGTGGTTT--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGATTCC
NNTGTGGTTT--
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGATTCC
NNHTGTGGTTWN-
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGATTCC
CTGTGGTTTN-
 A C G T A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGTGGATTCC
GCTGTGGTTT--
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTGGATTCC---
-GGGGATTCCCCC
 A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C A C G T A C G T A C G T
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGATTCC
TTTGCGGTTT--
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G G T C A A G C T C G A T G T A C A G T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T