Information for 7-AYGCACAC (Motif 17)

C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C
Reverse Opposite:
T A C G G A C T C T A G A G C T A C T G A G T C T C A G A G C T
p-value:1e-4
log p-value:-9.875e+00
Information Content per bp:1.656
Number of Target Sequences with motif288.0
Percentage of Target Sequences with motif27.32%
Number of Background Sequences with motif10449.3
Percentage of Background Sequences with motif22.19%
Average Position of motif in Targets97.8 +/- 61.9bp
Average Position of motif in Background99.5 +/- 74.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.73
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AYGCACAC------
CGAAGCACACAAAATA
 A C G T A C G T C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AYGCACAC------
AGCGGCACACACGCAA
 A C G T A C G T C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AYGCACAC
CCAGGAACAG
 A C G T A C G T C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AYGCACAC-----
NNTTTGCACACGGCCC
 A C G T A C G T A C G T C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AYGCACAC-
---CACGCA
 C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AYGCACAC--
TBGCACGCAA
 C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

ZSCAN4/MA1155.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AYGCACAC--------
-TGCACACACTGAAAA
 C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AYGCACAC---
-GGCACGCGTC
 C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T A C G T A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AYGCACAC--
GGCCACGCCCCCTT
 A C G T A C G T A C G T A C G T C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

EGR1/MA0162.3/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AYGCACAC-----
TACGCCCACGCATT
 A C G T C T G A A G T C C T A G T G A C T C G A A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T
G C A T G T C A G T A C C T A G A G T C A G T C A G T C T G C A A G T C A C T G A G T C C T G A G C A T G C A T