Information for 17-CTCACTGGCCAC (Motif 21)

A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C
Reverse Opposite:
A C T G A G C T A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-6.936e+00
Information Content per bp:1.972
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.5 +/- 49.4bp
Average Position of motif in Background83.9 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCACTGGCCAC-
-TGATTGGCTANN
 A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTCACTGGCCAC
CCGATTGGCT--
 A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCACTGGCCAC--
CAATCACTGGCAGAAT
 A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCACTGGCCAC
-WDNCTGGGCA-
 A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCACTGGCCAC---
CTGATTGGTCNATTT
 A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCACTGGCCAC---
---TYTGACCASWRG
 A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCACTGGCCAC
VCCTCTCTGDDY--
 A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCACTGGCCAC
NCTGATTGGNN--
 A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCACTGGCCAC
AGGTCANTGACCTN
 A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CTCACTGGCCAC-
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C C T G A A G T C A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T