Information for 20-CCAACCAACCAA (Motif 24)

G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A
Reverse Opposite:
A C G T C G A T C T A G A T C G A C G T A C G T C A T G A C T G A C G T A C G T A C T G A C T G
p-value:1e-2
log p-value:-6.214e+00
Information Content per bp:1.904
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif77.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets96.5 +/- 54.4bp
Average Position of motif in Background91.0 +/- 43.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCAACCAACCAA-----
CGACCCAATCAACGGTG
 G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

RREB1/MA0073.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCAACCAACCAA-----
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

NFYA/MA0060.3/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCAACCAACCAA-
--AACCAATCAGA
 G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A A C G T
A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCAACCAACCAA
ACTAGCCAATCA-
 A C G T G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

POL007.1_BREd/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCAACCAACCAA
--NANANAC---
 G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCAACCAACCAA
TAAYCYAATCAA
 G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A
G C A T T C G A C T G A G A T C A G T C G A T C G T C A G T C A A C G T A G T C C G T A C T G A

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCAACCAACCAA---
AAAAACCAATTAAGAA
 A C G T G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCAACCAACCAA
AAATGGACCAATCAG
 A C G T A C G T A C G T G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAACCAACCAA-
-CCATCAATCAAA
 G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A A C G T
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCAACCAACCAA
ACTATGCCAACCTACC--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T A C C G T A C G T A A G T C G T A C C G T A C G T A A T G C G A T C C G T A G T C A
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T