Information for 10-CAGGCACCCGCC (Motif 14)

A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C
Reverse Opposite:
T C A G A T C G G A T C C T A G A T C G T A C G G A C T A C T G A G T C A G T C A C G T A C T G
p-value:1e-12
log p-value:-2.801e+01
Information Content per bp:1.771
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif4.50%
Number of Background Sequences with motif692.2
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets102.6 +/- 38.8bp
Average Position of motif in Background96.9 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES7/MA0822.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CAGGCACCCGCC-
-TGGCACGTGCCA
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C A C G T
A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CAGGCACCCGCC-
-TGGCACGTGCCG
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C A C G T
A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGGCACCCGCC
--GACACGTGCC
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C
A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGGCACCCGCC
--GGCACGCGTC
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C
A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGCACCCGCC-
-SNGCACCTGCHS
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C A C G T
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGGCACCCGCC
--GACACGTGCC
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C
A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGGCACCCGCC--
--DGCAGCTGCYSS
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C A C G T A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGGCACCCGCC--
CAGGCCNNGGCCNN
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGGCACCCGCC
AAGGCAAGTGT-
 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCACCCGCC
VGCTGGCA------
 A C G T A C G T A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T