Information for 13-CTCCAGGCTGGA (Motif 21)

T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A
Reverse Opposite:
G A C T T G A C G A T C G C T A A C T G A T G C G A T C C G A T C T A G C T A G C T G A A T C G
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.717
Number of Target Sequences with motif164.0
Percentage of Target Sequences with motif13.66%
Number of Background Sequences with motif3975.4
Percentage of Background Sequences with motif8.25%
Average Position of motif in Targets97.5 +/- 62.7bp
Average Position of motif in Background100.5 +/- 64.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTCCAGGCTGGA
---TWGTCTGV-
 T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCCAGGCTGGA
---CTGTCTGG-
 T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCCAGGCTGGA-
---CWGGCGGGAA
 T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A A C G T
A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAGGCTGGA----
NNTNNTGTCTGGNNTNG
 A C G T T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTCCAGGCTGGA
-----NGCTN--
 T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCCAGGCTGGA---
----GGGCGGGAAGG
 T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCCAGGCTGGA--
----GGTCTGGCAT
 T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCCAGGCTGGA--
----WDNCTGGGCA
 T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCCAGGCTGGA
--CCAGACRSVB
 T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTCCAGGCTGGA
CGCCTCAGGCA---
 A C G T A C G T T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T