Information for 15-ATGAAATGAAAT (Motif 23)

C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T
Reverse Opposite:
G T C A C A G T G A C T A G C T T A G C C G T A G C A T G A C T A C G T A G T C G T C A A G C T
p-value:1e-9
log p-value:-2.106e+01
Information Content per bp:1.883
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif83.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets108.7 +/- 63.4bp
Average Position of motif in Background105.2 +/- 53.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.93
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATGAAATGAAAT
-GGYAATGAAA-
 C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T
A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATGAAATGAAAT
HDGYAATGAAAN
 C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATGAAATGAAAT
CGGAAGTGAAAC
 C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATGAAATGAAAT----
-TTGAATGAAATTCGA
 C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGAAATGAAAT-
-GGAAGTGAAAST
 C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T A C G T
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATGAAATGAAAT---
TAGGTAATAAAATTCA
 A C G T C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATGAAATGAAAT
-GGCMATGAAA-
 C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T
A C G T C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGAAATGAAAT----
AATGCAATAAAATTTAT
 A C G T C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGAAATGAAAT
--GCAATAAAAA
 C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T
A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATGAAATGAAAT-
-AGAAACGAAAGT
 C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T A C G T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T