Information for 4-ATAGCTTGAACC (Motif 4)

T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C
Reverse Opposite:
C A T G C T A G G C A T C G A T G T A C C T G A G T C A A C T G A G T C C G A T C T G A A C G T
p-value:1e-17
log p-value:-3.964e+01
Information Content per bp:1.729
Number of Target Sequences with motif202.0
Percentage of Target Sequences with motif16.82%
Number of Background Sequences with motif4328.4
Percentage of Background Sequences with motif8.98%
Average Position of motif in Targets96.2 +/- 40.8bp
Average Position of motif in Background98.7 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:ATAGCTTGAACC--
------TGAACTCA
 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ATAGCTTGAACC---
-----TTGAMCTTTG
 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATAGCTTGAACC------
-NNANTTGACCCCTNNNN
 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATAGCTTGAACC---
NGNTCTAGAACCNGV
 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATAGCTTGAACC---
NTTGATTGAATCWGV
 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T A C G T A C G T
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATAGCTTGAACC------
-TGTCGTGACCCCTTAAT
 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATAGCTTGAACC------
--NNCNTGACCCCGCTCT
 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATAGCTTGAACC-
-----ATAATCCC
 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATAGCTTGAACC--
NNANTGATTGATNNNN
 A C G T A C G T T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

ATF4/MA0833.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATAGCTTGAACC
TATTGCATCATCC
 A C G T T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C