Information for 5-AAMACACAAA (Motif 8)

C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A
Reverse Opposite:
A C G T A G C T A G C T A C T G A C G T C T A G A C G T A C G T A G C T C G A T
p-value:1e-14
log p-value:-3.370e+01
Information Content per bp:1.788
Number of Target Sequences with motif176.0
Percentage of Target Sequences with motif14.65%
Number of Background Sequences with motif3797.6
Percentage of Background Sequences with motif7.88%
Average Position of motif in Targets105.9 +/- 58.2bp
Average Position of motif in Background99.4 +/- 65.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAMACACAAA
AAACCACANN
 C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAMACACAAA-
AAACCACAGAN
 C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAMACACAAA
AAACCGCAAA
 C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAMACACAAA
NAAACCACAG-
 A C G T C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAMACACAAA-
NWAACCACADNN
 A C G T C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAMACACAAA-----
AAACAGACAAAGGAAT
 A C G T C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAMACACAAA
NANANAC---
 C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAMACACAAA---
--AAAACAAAGAA
 C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAMACACAAA
AAACCACAGC
 C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AAMACACAAA--
--AAAACAAAGG
 C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A A C G T A C G T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G