Information for 1-TCYACTTA (Motif 9)

A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A
Reverse Opposite:
A C G T C G T A C T G A A C T G A C G T C T A G A C T G C G T A
p-value:1e-13
log p-value:-3.202e+01
Information Content per bp:1.898
Number of Target Sequences with motif180.0
Percentage of Target Sequences with motif14.99%
Number of Background Sequences with motif3991.0
Percentage of Background Sequences with motif8.28%
Average Position of motif in Targets105.9 +/- 61.0bp
Average Position of motif in Background98.8 +/- 63.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----TCYACTTA-----
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TCYACTTA-
ACCACTTAA
 A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TCYACTTA-
ACCACTTAA
 A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----TCYACTTA-----
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TCYACTTA-----
TAAGCCACTTAACATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCYACTTA-
-GCACTTAA
 A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TCYACTTA--
ACCACTTGAA
 A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TCYACTTA
ATCCAC---
 A C G T A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TCYACTTA-----
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCYACTTA-
MRSCACTYAA
 A C G T A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A