Information for 6-CACTGCAA (Motif 12)

A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A
Reverse Opposite:
A C G T A G C T C A T G A T G C T G C A T C A G A G C T C T A G
p-value:1e-12
log p-value:-2.967e+01
Information Content per bp:1.842
Number of Target Sequences with motif328.0
Percentage of Target Sequences with motif24.98%
Number of Background Sequences with motif8064.1
Percentage of Background Sequences with motif16.96%
Average Position of motif in Targets94.9 +/- 54.1bp
Average Position of motif in Background98.1 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.87
Offset:-5
Orientation:forward strand
Alignment:-----CACTGCAA----
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

SOX4/MA0867.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCAA------
AACACTGCAATTGTTC
 A C G T A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCAA-----
AACACTGAAATTGTT
 A C G T A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CACTGCAA
CCACTTGAA
 A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CACTGCAA----
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCAA
NSCACTYVAV
 A C G T A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACTGCAA----
AGATGCAATCCC
 A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A A C G T A C G T A C G T A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACTGCAA
RSCACTYRAG
 A C G T A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACTGCAA
ACCACTTGAA
 A C G T A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACTGCAA-
HDGYAATGAAAN
 A C G T A C G T A C G T A G T C C T G A A G T C A C G T A T C G G T A C C T G A G T C A A C G T
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A