Information for 10-GCSATTCT (Motif 16)

A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T
Reverse Opposite:
C G T A C T A G C G T A G C T A C A G T A T G C C T A G G T A C
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.835
Number of Target Sequences with motif225.0
Percentage of Target Sequences with motif17.14%
Number of Background Sequences with motif5368.3
Percentage of Background Sequences with motif11.29%
Average Position of motif in Targets100.4 +/- 45.7bp
Average Position of motif in Background100.4 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCSATTCT--
NCCATTGTTY
 A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCSATTCT--
NNCCATTGTNN
 A C G T A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCSATTCT-
GCNGCCATCTTG
 A C G T A C G T A C G T A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCSATTCT---
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCSATTCT---
-CCATTGTTYB
 A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCSATTCT--
-CCATTGTTC
 A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCSATTCT---
-CCATTGTTNY
 A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T A C G T
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCSATTCT--
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C G T A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCSATTCT-----
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCSATTCT--
NCCATTGTTC
 A C T G A G T C T A C G G T C A C G A T G A C T G A T C C G A T A C G T A C G T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C