Information for 3-RTARTYCCAGCT (Motif 3)

C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T
Reverse Opposite:
C T G A T C A G A G T C C G A T C T A G C A T G T C A G C G T A A G C T G A C T C T G A A G T C
p-value:1e-24
log p-value:-5.756e+01
Information Content per bp:1.665
Number of Target Sequences with motif324.0
Percentage of Target Sequences with motif24.68%
Number of Background Sequences with motif6574.7
Percentage of Background Sequences with motif13.83%
Average Position of motif in Targets102.3 +/- 47.3bp
Average Position of motif in Background100.7 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-RTARTYCCAGCT----
GATATTGACAGCTGCGT
 A C G T C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RTARTYCCAGCT
---ATGCCAACC
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RTARTYCCAGCT----
NTATTGACAGCTNNTT
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T A C G T A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RTARTYCCAGCT
-AAATCACTGC-
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RTARTYCCAGCT
-AAATCACAGCA
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RTARTYCCAGCT----
GTATTGACAGCTNNTT
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RTARTYCCAGCT----
NTATTGACAGGTNNTN
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:RTARTYCCAGCT----
------HCAGCTGDTN
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RTARTYCCAGCT----
GTATTGACAGGTNNTT
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:RTARTYCCAGCT
----TGCCAGCB
 C T A G G A C T C T G A C T G A C G A T A G T C G T A C A G T C C G T A T C A G A G T C A G C T
A C G T A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G