Information for 6-ATTCTCCTGCCT (Motif 6)

C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G C T A G A G T C C G T A A T C G C T A G C G T A C T A G C G T A C G T A A C G T
p-value:1e-18
log p-value:-4.313e+01
Information Content per bp:1.860
Number of Target Sequences with motif181.0
Percentage of Target Sequences with motif13.79%
Number of Background Sequences with motif3215.0
Percentage of Background Sequences with motif6.76%
Average Position of motif in Targets101.6 +/- 41.1bp
Average Position of motif in Background101.2 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATTCTCCTGCCT-
TNTTATCTTATCTT
 A C G T C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

RELB/MA1117.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATTCTCCTGCCT
GAATTCCCCGG---
 A C G T A C G T C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T
C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------ATTCTCCTGCCT
ANNTCCATTGTTCNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ATTCTCCTGCCT-------
--NNTNNTGTCTGGNNTNG
 C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATTCTCCTGCCT
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----ATTCTCCTGCCT
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCTCCTGCCT
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ATTCTCCTGCCT-
--NNACTTGCCTT
 C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATTCTCCTGCCT
CTCATTGTC------
 A C G T A C G T A C G T C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATTCTCCTGCCT
CCATTGTTNY----
 A C G T A C G T C G T A A C G T A C G T G A T C A C G T G A T C T A G C A C G T C T A G A G T C A G T C A G C T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T