Information for 5-AGTCRCTG (Motif 13)

T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G
Reverse Opposite:
G A T C T G C A C T A G A G C T A C T G T G C A A T G C A G C T
p-value:1e-6
log p-value:-1.513e+01
Information Content per bp:1.575
Number of Target Sequences with motif214.0
Percentage of Target Sequences with motif26.65%
Number of Background Sequences with motif9079.7
Percentage of Background Sequences with motif19.32%
Average Position of motif in Targets97.0 +/- 42.6bp
Average Position of motif in Background100.1 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGTCRCTG-------
CAATCACTGGCAGAAT
 A C G T T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NR1H4/MA1110.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGTCRCTG-
NAGGTCATTGA
 A C G T A C G T T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G A C G T
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTCRCTG
RRTCAATA
 T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGTCRCTG
AGTCACGC
 T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTCRCTG
HNRAATCAAT-
 A C G T A C G T A C G T T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGTCRCTG---
VCCTCTCTGDDY
 A C G T T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G A C G T A C G T A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTCRCTG----
NAGGTCANTGACCT
 A C G T A C G T T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G A C G T A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

EN2/MA0642.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTCRCTG--
GNTAATTGGN
 T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G A C G T A C G T
T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTCRCTG-
-NTAATTGG
 T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G A C G T
A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTCRCTG-
AAATCACTGC
 A C G T T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G A C G T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C