Information for 11-AGAGAGAGAGAG (Motif 15)

T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G
Reverse Opposite:
A G T C A G C T A G T C A G C T A G T C A G C T A G T C A G C T A G T C A G C T G A T C A G C T
p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.929
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif270.5
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets62.0 +/- 52.3bp
Average Position of motif in Background97.6 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAG-
-GAAAGTGAAAGT
 T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G A C G T
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGAGAGAG
RHHCAGAGAGGB----
 A C G T A C G T A C G T A C G T T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAG--
NNNACCGAGAGTNNN
 A C G T T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAGAGAGAGAG-
-GAAAGTGAAAGT
 T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGAGAGAGAGAG----
-TTGACCGAGAATTCC
 T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G A C G T A C G T A C G T A C G T
A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGAGAG----
GGGTGAGTGACAGGCGG
 A C G T T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAG
AGGTGNCAGACAG
 A C G T T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAG-
-VTGYGKGGGAGK
 T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G A C G T
A C G T T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G

PRDM1/MA0508.2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAG
-GTGAAAGTGA-
 T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G
A C G T C T A G C G A T A C T G C G T A G C T A G T C A C T A G A G C T C T A G C G T A A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AGAGAGAGAGAG-----
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A