Information for 9-CAGAGTCT (Motif 19)

A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C G T A G T C A C G T A C T G
p-value:1e-3
log p-value:-9.024e+00
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.98%
Number of Background Sequences with motif1232.8
Percentage of Background Sequences with motif2.62%
Average Position of motif in Targets112.3 +/- 70.6bp
Average Position of motif in Background99.2 +/- 63.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAGAGTCT----
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGAGTCT--
--TWGTCTGV
 A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

BACH2/MA1101.1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGTCT--
NNTGCTGAGTCATN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
C G T A G A C T G C A T A T C G T G A C G C A T C A T G G C T A T A C G C G A T G T A C C T G A A C G T A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGAGTCT--
--CTGTCTGG
 A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGAGTCT-
HTGCTGAGTCAT
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGAGTCT--
VBSYGTCTGG
 A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGAGTCT-----
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGAGTCT-
RHHCAGAGAGGB
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGTCT----
NTGCTGAGTCATCCN
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTCT-
NRRGGGTCTT
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T A C G T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T