Information for 3-RGCAGRAGAA (Motif 6)

C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A
Reverse Opposite:
A C G T A G C T A G T C A G C T G A T C T A G C A C G T A C T G G A T C G A T C
p-value:1e-12
log p-value:-2.846e+01
Information Content per bp:1.682
Number of Target Sequences with motif151.0
Percentage of Target Sequences with motif18.80%
Number of Background Sequences with motif4849.3
Percentage of Background Sequences with motif10.32%
Average Position of motif in Targets97.0 +/- 41.2bp
Average Position of motif in Background102.2 +/- 55.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:RGCAGRAGAA
---AGAGGAA
 C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RGCAGRAGAA---
-AAAGRGGAAGTG
 C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T A C G T A C G T
A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RGCAGRAGAA----
TATCATTAGAACGCT
 A C G T C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:RGCAGRAGAA--
--AACAGGAAGT
 C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RGCAGRAGAA---
---RNAACAATGG
 C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:RGCAGRAGAA-
---ACCGGAAG
 C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T
A C G T A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G

PB0032.1_IRC900814_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RGCAGRAGAA-----
ATTTACGACAAATAGC
 A C G T C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RGCAGRAGAA----
TTAAGAGGAAGTTA
 C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T A C G T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RGCAGRAGAA----
TTGACCGAGAATTCC
 A C G T C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---RGCAGRAGAA--
ATTTGCATAACAAAG
 A C G T A C G T A C G T C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G