Information for 5-AHTCCGGTTGAT (Motif 7)

C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C G T C A C T G A G T A C G T A C A T C G A T C G C G T A C A T G A C G T
p-value:1e-11
log p-value:-2.688e+01
Information Content per bp:1.788
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets85.5 +/- 63.3bp
Average Position of motif in Background78.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AHTCCGGTTGAT-------
--ACCGGTTGATCACCTGA
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AHTCCGGTTGAT---
-------TTGATTGN
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AHTCCGGTTGAT-----
AATCCCTTTGATCTATC
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AHTCCGGTTGAT-----
ATTTCCTTTGATCTATA
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AHTCCGGTTGAT-----
NNTTCCTTTGATCTANA
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AHTCCGGTTGAT-----
NNTTCCTTTGATCTNNA
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AHTCCGGTTGAT---
---NNTGTGGATTSS
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AHTCCGGTTGAT----
-----TGTGGATTNNN
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AHTCCGGTTGAT----
-AACCCTTTGATCTTT
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AHTCCGGTTGAT
------TTTAAT
 C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T