Information for 5-CCTAGBCTCA (Motif 11)

G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A
Reverse Opposite:
A G C T C A T G C G T A T A C G T A G C G A T C G A C T T G C A T C A G C A T G
p-value:1e-9
log p-value:-2.272e+01
Information Content per bp:1.713
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif794.0
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets99.5 +/- 57.6bp
Average Position of motif in Background96.5 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCTAGBCTCA-
SCCTAGCAACAG
 A C G T G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

POL002.1_INR/Jaspar

Match Rank:2
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CCTAGBCTCA-----
-------TCAGTCTT
 G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCTAGBCTCA
--TWGTCTGV
 G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCTAGBCTCA-
---NGGATTAN
 G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A A C G T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCTAGBCTCA
NRBCARRGGTCA
 A C G T A C G T G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A

VDR/MA0693.2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCTAGBCTCA
--TGAGTTCA
 G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A
A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCTAGBCTCA--
--KGGCCYCWTD
 G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A A C G T A C G T
A C G T A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGBCTCA
GCTCGGSCTC-
 A C G T G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCTAGBCTCA
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCTAGBCTCA---
--AAACCACAGAN
 G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C