Information for 15-CATTCTTCTGGA (Motif 18)

A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
Reverse Opposite:
C A G T T G A C G T A C C G T A A C T G C G T A C G T A C A T G C G T A C G T A A C G T A C T G
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.875
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif44.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets69.6 +/- 49.3bp
Average Position of motif in Background109.8 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATTCTTCTGGA
CCATTGTTYB---
 A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATTCTTCTGGA-
TAATTGTTCTAAAC
 A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATTCTTCTGGA-
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATTCTTCTGGA
CCATTGTTTT---
 A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CATTCTTCTGGA
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATTCTTCTGGA
NCCATTGTTC----
 A C G T A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATTCTTCTGGA
NCCATTGTTY----
 A C G T A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATTCTTCTGGA
NNCCATTGTNN----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATTCTTCTGGA
CACATTCCAT----
 A C G T A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CATTCTTCTGGA
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A